Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921901.1_cds_XP_016470788.1_63198
CDS Infomation

[gene=LOC107793030] [db_xref=GeneID:107793030] [protein=4-coumarate--CoA ligase-like 6] [protein_id=XP_016470788.1] [location=complement(join(6203..6316,6498..6600,7236..7303,7554..7699,8183..8372,8773..9849))] [gbkey=CDS]
Sequence

ATGGCAACATTCTTGAAACCCCATTTGAACTCCCATGCCACAGAGGATGAAGTTGTGAAA
AACCCTTCTAAAACCCCCTTTTGGTACTGTGCTGAAACAGGAGTATACAACAGTAAGTAC
CCTTTTATTAAACTGCCAGAAGACCCTTTTCTTGATGTTGTTTCCTTCATTTTCTCACAC
AAGCATGCTGGATTCTCAGCTCTTGTTGACTCCACTTCTGGCATTTCACTTCCCTATTCA
GTGTTTTACTCTATGGTTAAGTCCATGGCTAGTAGTCTTCACCAAAGGGGTGTCTCACCA
GGTGATGTTGTGTTAATTCTCCTCCCAAATTCCATTTATTTCCCTGTTATTTTGTTGGGT
GTTTTGAGTCTTGGTGCAATTGTAACCACTATGAATCCCTTCAGTAGTTTGTTAGAGATT
AAAAAACAAGCCCTTGATTGTGGTGTTACTCTGGCATTTACTACTGATGATAGAGTTGAT
AAATGTGCTGCATTAGGCATTCCTGTAATAGGGGTGCCAGAAAGTTTGGTTTCTAATTCA
AATGGTAGTCAAAGTTCTGGTTTTTATGAGCTGATTTCATGTGATCCCAACTGGGATTCA
AGTCCTAAAATAAGTCAGCAAGATACAGCAGCAATTCTGTACTCGTCGGGTACTACTGGT
ACAGGCAAAGGTGTTGTCTTGACTCATGCGAACTTTATAGCCATGGTACAACTTTTTGTG
AGGTTTGAAGCTTCACAATATGAATATTTGAGTACTGAGAATGTGTACTTGGCTGTTGTA
CCGATGTTTCATGTGTACGGGCTCTCTCTCTTTGTGATGGGATTGTTGTCATTGGGGTCT
ACCGTTGTTGTGATGAGAAAATTTGATGCTGATGAGATGGTGAAAGCTATTGAAAGATAC
GGCGTCACTCACTTCCCCACAGTCCCACCATTATTTATGGCGTTGACTAGAAGAGCAAAG
GATGGTACTTCGAGCAGTATGAAGAGCTTGAAACAGGTTTCATGTGGCGCAGCTCCCTTA
AACACAAAATCTATTGAAGAATTTGTTCGCACTCTCCCAGATGTTGATCTCATTCAGGGA
TATGGCATGACTGAGTCAACTGCTATTGGAACACGTGGTTACAATTCTGAAAAGCTTCGT
AATTATTCTTCGGTAGGGCTTCTAGCTCCAAACATGCAAGCTAAAGTAGTGGATTGGATC
ACAGGTTCACCCTTACCTCCCAACTGCATGGGCGAGCTCTGGCTTTGTGGACCTGGTGTC
ATGAAAGGGTACTTGAATAACTCAGAGGCTACTAAGTCTACGATTGATGGAAATGGTTGG
CTCCACACTGGTGATATTACTTATTTTGATGAAGAAGGATATCTTTATGTCATTGACCGA
CTGAAAGAGATTATCAAATATAAGGGCTTTCAGATAGCTCCTGCTGATTTAGAAGCTGTA
TTGGTCTCACATCCAGATATCGTTGATGCTGCAGTAACAGGAGCCAGAGATGAGGAAGCT
GGAGAAATTCCAGTGGCATTTGTCGTCAAGAGAGATGGGTGTGCACTTTCCCAAACAGAT
GTGATCGACTTTGTTTGTAAGCAGGTTGCACCATACAAGAAGATTAGAAGGGTTTACTTT
AAAGCTTCAATACCCAGGTCTGCAGCTGGAAAGATTCTTAGAAAGGAGTTAAGGAACTTA
TTAACTTCCAAATTGTAG

Peptide Sequence

PEP ID

XP_016470788.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase-like 6 [Nicotiana tabacum]
Sequence

MATFLKPHLNSHATEDEVVKNPSKTPFWYCAETGVYNSKYPFIKLPEDPFLDVVSFIFSH
KHAGFSALVDSTSGISLPYSVFYSMVKSMASSLHQRGVSPGDVVLILLPNSIYFPVILLG
VLSLGAIVTTMNPFSSLLEIKKQALDCGVTLAFTTDDRVDKCAALGIPVIGVPESLVSNS
NGSQSSGFYELISCDPNWDSSPKISQQDTAAILYSSGTTGTGKGVVLTHANFIAMVQLFV
RFEASQYEYLSTENVYLAVVPMFHVYGLSLFVMGLLSLGSTVVVMRKFDADEMVKAIERY
GVTHFPTVPPLFMALTRRAKDGTSSSMKSLKQVSCGAAPLNTKSIEEFVRTLPDVDLIQG
YGMTESTAIGTRGYNSEKLRNYSSVGLLAPNMQAKVVDWITGSPLPPNCMGELWLCGPGV
MKGYLNNSEATKSTIDGNGWLHTGDITYFDEEGYLYVIDRLKEIIKYKGFQIAPADLEAV
LVSHPDIVDAAVTGARDEEAGEIPVAFVVKRDGCALSQTDVIDFVCKQVAPYKKIRRVYF
KASIPRSAAGKILRKELRNLLTSKL

Transcript Sequence

Gene sequence data has not been registered.